Publications of P Müller

Pomreinke, A.; Müller, P.: Zebrafish nampt-a mutants are viable despite perturbed primitive hematopoiesis. Hereditas 161 (1), 14 (2024)

Knabl, P.; Schauer, A.; Pomreinke, A.; Zimmermann, B.; Rogers, K.; Čapek, D.; Müller, P.; Genikhovich, G.: Analysis of SMAD1/5 target genes in a sea anemone reveals ZSWIM4-6 as a novel BMP signaling modulator. eLife 13, e80803 (2024)

Toulany, N.; Morales-Navarrete, H.; Čapek, D.; Grathwohl, J.; Ünalan, M.; Müller, P.: Uncovering developmental time and tempo using deep learning. Nature Methods 20 (12), pp. 2000 - 2010 (2023)

Maksymenko, K.; Maurer, A.; Aghaallaei, N.; Barry, C.; Borbarán-Bravo, N.; Ullrich, T.; Dijkstra, T.; Hernandez-Alvarez, B.; Müller, P.; Lupas, A. et al.; Skokowa, J.; ElGamacy, M.: The design of functional proteins using tensorized energy calculations. Cell Reports Methods 3 (8), 100560 (2023)

Čapek, D.; Safroshkin, M.; Morales-Navarrete, H.; Toulany, N.; Arutyunov, G.; Kurzbach, A.; Bihler, J.; Hagauer, J.; Kick, S.; Jones, F. et al.; Jordan, B.; Müller, P.: EmbryoNet: using deep learning to link embryonic phenotypes to signaling pathways. Nature Methods 20 (6), pp. 815 - 823 (2023)

Müller, P.: AI identifies developmental defects and drug mechanisms in embryos. Nature Methods 20 (6), pp. 793 - 794 (2023)

Kuhn, T.; Landge, A.; Mörsdorf, D.; Coßmann, J.; Gerstenäcker, J.; Čapek, D.; Müller, P.; Gebhardt, J.: Single-molecule tracking of Nodal and Lefty in live zebrafish embryos supports hindered diffusion model. Nature Communications 13, 6101 (2022)

Preiß, H.; Kögler, A.; Mörsdorf, D.; Čapek, D.; Soh, G.; Rogers, K.; Morales-Navarrete, H.; Almuedo-Castillo, M.; Müller, P.: Regulation of Nodal signaling propagation by receptor interactions and positive feedback. eLife 11, e66397 (2022)

Skokowa, J.; Hernandez Alvarez, B.; Coles, M.; Ritter, M.; Nasri, M.; Haaf, J.; Aghaallaei, N.; Xu, Y.; Mir, P.; Krahl, A.-C. et al.; Rogers, K.; Maksymenko, K.; Bajoghli, B.; Welte, K.; Lupas, A.; Müller, P.; ElGamacy, M.: A topological refactoring design strategy yields highly stable granulopoietic proteins. Nature Communications 13 (1), 2948 (2022)

Čapek, D.; Ünalan, M.; Müller, P.: Wie Tiere sich selbst konstruieren. Biospektrum 2021 (05), pp. 473 - 479 (2021)

Soh, G.; Kögler, A.; Müller, P.: A Simple and Effective Transplantation Device for Zebrafish Embryos. Journal of Visualized Experiments 2021, 174 (2021)

Hernandez Alvarez, B.; Skokowa, J.; Coles, M.; Mir, P.; Nasri, M.; Weidmann, L.; Rogers, K.; Welte, K.; Lupas, A.; Müller, P. et al.; ElGamacy, M.: Design of novel granulopoietic proteins by topological rescaffolding. PLoS Biology 18 (12), e3000919 (2020)

Rogers, K.; ElGamacy, M.; Jordan, B.; Müller, P.: Optogenetic investigation of BMP target gene expression diversity. eLife 9, e58641 (2020)

Böffert, R.; Businger, R.; Preiß, H.; Ehmann, D.; Truffault, V.; Simon, C.; Ruetalo, N.; Hamprecht, K.; Müller, P.; Wehkamp, J. et al.; Schindler, M.: The human α-defensin-derived peptide HD5(1-9) inhibits cellular attachment and entry of human cytomegalovirus. Antiviral Research 177, 104779 (2020)

Landge, A.; Jordan, B.; Diego, X.; Müller, P.: Pattern formation mechanisms of self-organizing reaction-diffusion systems. Developmental Biology 460 (1), pp. 2 - 11 (2020)

Müller, P.; El-Sherif, E.: A systems-level view of pattern formation mechanisms in development. Developmental Biology 460 (1), p. 1 (2020)

Soh, G.; Pomreinke, A.; Müller, P.: Integration of Nodal and BMP Signaling by Mutual Signaling Effector Antagonism. Cell Reports 31 (1), 107487 (2020)

Ünalan, M.; Müller, P.: Development: Painting Flowers with MYBs. Current Biology 30 (5), pp. R227 - R229 (2020)

Čapek, D.; Müller, P.: Positional information and tissue scaling during development and regeneration. Development 146 (24), dev177709 (2019)

Morishima, T.; Krahl, A.-C.; Nasri, M.; Xu, Y.; Aghaallaei, N.; Findik, B.; Klimiankou, M.; Ritter, M.; Hartmann, M.; Gloeckner, C. et al.; Stefanczyk, S.; Lindner, C.; Oswald, B.; Bernhard, R.; Hähnel, K.; Hermanutz-Klein, U.; Ebinger, M.; Handgretinger, R.; Casadei, N.; Welte, K.; Andre, M.; Müller, P.; Bajoghli, B.; Skokowa, J.: LMO2 activation by deacetylation is indispensable for hematopoiesis and T-ALL leukemogenesis. Blood 134 (14), pp. 1159 - 1175 (2019)